Abstract:Background Bacillus velezensis Ba-0321 obtained previously is a biocontrol strain with plant growth-promoting and disease-preventing effects, capable of producing a variety of antimicrobial substances.Objective This study screened novel broad-spectrum and effective antimicrobial proteins, analyzed their antimicrobial mechanisms, and determined their control efficacy against tobacco diseases, aiming to lay a foundation for developing new antimicrobial agents.Methods Extracellular crude proteins from Ba-0321 were isolated through ammonium sulfate precipitation at varying saturation levels, followed by centrifugation and dialysis. The Oxford cup method was employed to assess the antimicrobial activity, and the protein stability was evaluated under different temperature and pH conditions. The antimicrobial components within the crude protein extracts were further characterized by LC-MS/MS. Histochemical staining was combined with qPCR analysis of disease resistance-related genes to reveal the mechanisms of tobacco resistance induced by the crude proteins. Inoculation assays were conducted to validate the efficacy of these proteins against Fusarium root rot and brown spot disease in tobacco.Results When ammonium sulfate saturation was 40%, the extracellular crude proteins precipitated from the fermentation supernatant of Ba-0321 exhibited the strongest antifungal activity against Fusarium oxysporum, with an inhibition rate of 49.16%. The proteins remained stable at 40-90 ℃ and pH 7.0-11.0. Moreover, they exhibited inhibitory activities against other tobacco pathogenic fungi including Fusarium solani, Phytophthora nicotianae, Rhizoctonia solani, Alternaria alternata, and Diaporthe. LC-MS/MS analysis identified multiple antimicrobial proteins in the extracellular crude protein fraction of Ba-0321, which included β-glucanase, chitosanase, α-amylase, subtilisin, serine protease, chitin-binding protein, and the antimicrobial peptide LCI, along with seven unidentified proteins. The crude proteins triggered hypersensitive response (HR) and hydrogen peroxide (H2O2) accumulation in tobacco, activated the expression of key genes (including NtNPR1, NtPR1a, NtEIN2, NtEIN3, NtJAR1, and NtPDF1.2) involved in salicylic acid (SA), ethylene (ET), and jasmonic acid (JA) signaling pathways, thereby inducing systemic disease resistance in tobacco. The control efficacies of extracellular crude proteins from Ba-0321 against the root rot caused by F. oxysporum and the brown spot disease caused by A. alternata in tobacco reached 42.88% and 68.87%, respectively.Conclusion The extracellular crude proteins of strain Ba-0321 can be applied as biopesticides or plant immunity inducers for the green control of tobacco diseases.